BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014E07LP1|AL426699
(749 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig881 1463 0.0
>3x_Contig881
Length = 2934
Score = 1463 bits (738), Expect = 0.0
Identities = 744/746 (99%)
Strand = Plus / Plus
Query: 1 actcctcattcttttctctcaacatttacaggatccgaaaaaaatcagtttccaattaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2189 actcctcattcttttctctcaacatttacaggatccgaaaaaaatcagtttccaattaag 2248
Query: 61 cgaaacgaacgactcctattgttctatacttaaagataaatgcggaaccgaaaccactaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2249 cgaaacgaacgactcctattgttctatacttaaagataaatgcggaaccgaaaccactaa 2308
Query: 121 gttgctcgacaaggaagaatgtctagaagagtttttcggagaacatgatgagatagagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2309 gttgctcgacaaggaagaatgtctagaagagtttttcggagaacatgatgagatagagaa 2368
Query: 181 ttatgaaaaaaccttaaaagaatttaagtccttcctgtccaaatacattacttttcgtcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2369 ttatgaaaaaaccttaaaagaatttaagtccttcctgtccaaatacattacttttcgtcg 2428
Query: 241 agaaaaaatcagctccattaatctattgtctcagaactcttctttcactgcattttggca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2429 agaaaaaatcagctccattaatctattgtctcagaactcttctttcactgcattttggca 2488
Query: 301 gaaagagataaacctgttagactcactcaaaggtcaatttgaaagcaagaaagaagtgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2489 gaaagagataaacctgttagactcactcaaaggtcaatttgaaagcaagaaagaagtgat 2548
Query: 361 gtggtatgagaaatacggcaatgacgagaagattaagataccaacggtgcctttcccacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2549 gtggtatgagaaatacggcaatgacgagaagattaagataccaacggtgcctttcccacc 2608
Query: 421 gccaagctggattgactacgagaatatgagagtatgaccatatcgaatgggattgagtta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2609 gccaagctggattgactacgagaatatgagagtatgaccatatcgaatgggattgagtta 2668
Query: 481 aattaaatcaggatagtgggttacgttagatagtttttgaatcccagtatttagttattg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2669 aattaaatcaggatagtgggttacgttagatagtttttgaatcccagtatttagttattg 2728
Query: 541 tatcaacggtaagtatatttatgtatttatacctaaataaacgcccgttttcacagataa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2729 tatcaacggtaagtatatttatgtatttatacctaaataaacgcccgttttcacagataa 2788
Query: 601 ttgaatggacttaaagccagaaaatccatcatcgggctcacttaccgggtatttttcatc 660
|||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 2789 ttgaatggacttaaagccagaaaatccatcatcgggctcacttaccggatattttacatc 2848
Query: 661 gtatccgatcttattaaggtttctcgcacattataccttcttgccttgaaaataataaag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2849 gtatccgatcttattaaggtttctcgcacattataccttcttgccttgaaaataataaag 2908
Query: 721 acacgaattacagtatcgagtacccg 746
||||||||||||||||||||||||||
Sbjct: 2909 acacgaattacagtatcgagtacccg 2934
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5763
Number of Sequences: 1807
Number of extensions: 5763
Number of successful extensions: 31
Number of sequences better than 1.0e-20: 1
length of query: 749
length of database: 10,358,551
effective HSP length: 16
effective length of query: 733
effective length of database: 10,329,639
effective search space: 7571625387
effective search space used: 7571625387
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)